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BIBM
2008
IEEE
212views Bioinformatics» more  BIBM 2008»
15 years 8 months ago
Analysis of Multiplex Gene Expression Maps Obtained by Voxelation
Background: Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological disease. Researchers have previously used voxelatio...
Li An, Hongbo Xie, Mark H. Chin, Zoran Obradovic, ...
BIBM
2008
IEEE
105views Bioinformatics» more  BIBM 2008»
15 years 8 months ago
Energy Profile and Secondary Structure Impact shRNA Efficacy
Many characteristics of functional synthetic siRNAs have been identified. Our three-phase algorithm was developed to design siRNA on a wholegenome scale based on these characteris...
Hong Zhou, Xiao Zeng
BIBM
2008
IEEE
112views Bioinformatics» more  BIBM 2008»
15 years 8 months ago
Fast Alignments of Metabolic Networks
Network alignments are extensively used for comparing, exploring, and predicting biological networks. Existing alignment tools are mostly based on isomorphic and homeomorphic embe...
Qiong Cheng, Piotr Berman, Robert W. Harrison, Ale...
BIBE
2007
IEEE
101views Bioinformatics» more  BIBE 2007»
15 years 8 months ago
A Robotic System for Real-time Tumor Manipulation During Image guided Breast Biopsy
Breast biopsy guided by imaging techniques such as ultrasound is widely used to evaluate suspicious masses within the breast. Currently, ultrasound imaging does not allow live guid...
Vishnu Mallapragada, Nilanjan Sarkar, Tarun Kanti ...
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BIBE
2007
IEEE
128views Bioinformatics» more  BIBE 2007»
15 years 8 months ago
QOMA2: Optimizing the alignment of many sequences
Abstract—We consider the problem of aligning multiple protein sequences with the goal of maximizing the SP (Sum-of-Pairs) score, when the number of sequences is large. The QOMA (...
Xu Zhang, Tamer Kahveci