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BIBM
2010
IEEE
158views Bioinformatics» more  BIBM 2010»
14 years 11 months ago
Protein-protein interaction prediction via Collective Matrix Factorization
Abstract--Protein-protein interactions (PPI) play an important role in cellular processes and metabolic processes within a cell. An important task is to determine the existence of ...
Qian Xu, Evan Wei Xiang, Qiang Yang
BIOINFORMATICS
2011
14 years 8 months ago
All-atom knowledge-based potential for RNA structure prediction and assessment
Motivation: Over the recent years, the vision that RNA simply serves as information transfer molecule has dramatically changed. The study of the sequence/structure/function relati...
Emidio Capriotti, Tomás Norambuena, Marc A....
DNA
2011
Springer
227views Bioinformatics» more  DNA 2011»
14 years 1 months ago
Cooperative Assembly Systems
Several molecular systems form large-scale objects. One would like to understand their assembly and how this assembly is regulated. As a first step, we investigate the phase trans...
Vincent Danos, Heinz Koeppl, John Wilson-Kanamori
SIGMOD
2004
ACM
196views Database» more  SIGMOD 2004»
16 years 1 months ago
FARMER: Finding Interesting Rule Groups in Microarray Datasets
Microarray datasets typically contain large number of columns but small number of rows. Association rules have been proved to be useful in analyzing such datasets. However, most e...
Gao Cong, Anthony K. H. Tung, Xin Xu, Feng Pan, Ji...
EDBT
2004
ACM
230views Database» more  EDBT 2004»
16 years 1 months ago
Flexible Integration of Molecular-Biological Annotation Data: The GenMapper Approach
Molecular-biological annotation data is continuously being collected, curated and made accessible in numerous public data sources. Integration of this data is a major challenge in ...
Hong Hai Do, Erhard Rahm