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BMCBI
2006
100views more  BMCBI 2006»
15 years 1 months ago
Using the nucleotide substitution rate matrix to detect horizontal gene transfer
Background: Horizontal gene transfer (HGT) has allowed bacteria to evolve many new capabilities. Because transferred genes perform many medically important functions, such as conf...
Micah Hamady, M. D. Betterton, Rob Knight
139
Voted
SIGMOD
2010
ACM
324views Database» more  SIGMOD 2010»
15 years 6 months ago
Similarity search and locality sensitive hashing using ternary content addressable memories
Similarity search methods are widely used as kernels in various data mining and machine learning applications including those in computational biology, web search/clustering. Near...
Rajendra Shinde, Ashish Goel, Pankaj Gupta, Debojy...
BMCBI
2010
214views more  BMCBI 2010»
15 years 1 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
133
Voted
PVLDB
2010
161views more  PVLDB 2010»
14 years 12 months ago
Annotating and Searching Web Tables Using Entities, Types and Relationships
Tables are a universal idiom to present relational data. Billions of tables on Web pages express entity references, attributes and relationships. This representation of relational...
Girija Limaye, Sunita Sarawagi, Soumen Chakrabarti
CVPR
2009
IEEE
16 years 8 months ago
Echocardiogram View Classification using Edge Filtered Scale-invariant Motion Features
In an 2D echocardiogram exam, an ultrasound probe samples the heart with 2D slices. Changing the orientation and position on the probe changes the slice viewpoint, altering the ...
Ritwik Kumar, Fei Wang, David Beymer, Tanveer Fath...