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» From Nondeterministic Suffix Automaton to Lazy Suffix Tree
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66
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BIRTHDAY
2010
Springer
15 years 3 months ago
From Nondeterministic Suffix Automaton to Lazy Suffix Tree
Given two strings, a pattern P of length m and a text T of length n over some alphabet of size , we consider the exact string matching problem, i.e. we want to report all occurren...
Kimmo Fredriksson
STACS
1992
Springer
15 years 4 months ago
Speeding Up Two String-Matching Algorithms
We show how to speed up two string-matching algorithms: the Boyer-Moore algorithm (BM algorithm), and its version called here the reverse factor algorithm (RF algorithm). The RF al...
Maxime Crochemore, Thierry Lecroq, Artur Czumaj, L...
115
Voted
CSR
2006
Springer
15 years 3 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan