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BMCBI
2011
14 years 8 months ago
RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome contigs assembled from DNA reads of environmental samples. Because of the diver...
Ozkan U. Nalbantoglu, Samuel F. Way, Steven H. Hin...
BMCBI
2010
190views more  BMCBI 2010»
15 years 1 months ago
Sample size and statistical power considerations in high-dimensionality data settings: a comparative study of classification alg
Background: Data generated using `omics' technologies are characterized by high dimensionality, where the number of features measured per subject vastly exceeds the number of...
Yu Guo, Armin Graber, Robert N. McBurney, Raji Bal...
BMCBI
2011
14 years 5 months ago
RegNetB: Predicting Relevant Regulator-Gene Relationships in Localized Prostate Tumor Samples
Background: A central question in cancer biology is what changes cause a healthy cell to form a tumor. Gene expression data could provide insight into this question, but it is dif...
Angel Alvarez, Peter J. Woolf
ICDM
2008
IEEE
97views Data Mining» more  ICDM 2008»
15 years 7 months ago
Semi-supervised Learning from General Unlabeled Data
We consider the problem of Semi-supervised Learning (SSL) from general unlabeled data, which may contain irrelevant samples. Within the binary setting, our model manages to better...
Kaizhu Huang, Zenglin Xu, Irwin King, Michael R. L...
CIKM
2009
Springer
15 years 6 months ago
Probabilistic models for topic learning from images and captions in online biomedical literatures
Biomedical images and captions are one of the major sources of information in online biomedical publications. They often contain the most important results to be reported, and pro...
Xin Chen, Caimei Lu, Yuan An, Palakorn Achananupar...