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114
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BMCBI
2007
151views more  BMCBI 2007»
15 years 21 days ago
A statistical method to incorporate biological knowledge for generating testable novel gene regulatory interactions from microar
Background: The incorporation of prior biological knowledge in the analysis of microarray data has become important in the reconstruction of transcription regulatory networks in a...
Peter Larsen, Eyad Almasri, Guanrao Chen, Yang Dai
112
Voted
COLING
2008
15 years 2 months ago
A Hybrid Generative/Discriminative Framework to Train a Semantic Parser from an Un-annotated Corpus
We propose a hybrid generative/discriminative framework for semantic parsing which combines the hidden vector state (HVS) model and the hidden Markov support vector machines (HMSV...
Deyu Zhou, Yulan He
BMCBI
2010
144views more  BMCBI 2010»
15 years 21 days ago
Identifying overrepresented concepts in gene lists from literature: a statistical approach based on Poisson mixture model
Background: Large-scale genomic studies often identify large gene lists, for example, the genes sharing the same expression patterns. The interpretation of these gene lists is gen...
Xin He, Moushumi Sen Sarma, Xu Ling, Brant W. Chee...
ICWS
2009
IEEE
14 years 10 months ago
From Workflow Models to Executable Web Service Interfaces
Workflow models have been used and refined for years to execute processes within organisations. To deal with collaborative processes (choreographies) these internal workflow model...
Armin Haller, Mateusz Marmolowski, Walid Gaaloul, ...
SOFTVIS
2005
ACM
15 years 6 months ago
Adding parallelism to visual data flow programs
Programming in parallel is an error-prone and complex task compounded by the lack of tool support for both programming and debugging. Recent advances in compiler-directed shared m...
Philip T. Cox, Simon Gauvin, Andrew Rau-Chaplin