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BMCBI
2011
14 years 4 months ago
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
Background: Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for seque...
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzy...
CIKM
2005
Springer
15 years 6 months ago
Optimizing candidate check costs for bitmap indices
In this paper, we propose a new strategy for optimizing the placement of bin boundaries to minimize the cost of query evaluation using bitmap indices with binning. For attributes ...
Doron Rotem, Kurt Stockinger, Kesheng Wu
133
Voted
BMCBI
2005
122views more  BMCBI 2005»
15 years 18 days ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
JCO
2011
115views more  JCO 2011»
14 years 7 months ago
Approximation scheme for restricted discrete gate sizing targeting delay minimization
Discrete gate sizing is a critical optimization in VLSI circuit design. Given a set of available gate sizes, discrete gate sizing problem asks to assign a size to each gate such th...
Chen Liao, Shiyan Hu
118
Voted
ICPR
2008
IEEE
16 years 1 months ago
Visual features with semantic combination using Bayesian network for a more effective image retrieval
In many vision problems, instead of having fully annotated training data, it is easier to obtain just a subset of data with annotations, because it is less restrictive for the use...
Sabine Barrat, Salvatore Tabbone