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ESA
2008
Springer
102views Algorithms» more  ESA 2008»
15 years 4 months ago
Succinct Representations of Arbitrary Graphs
Abstract. We consider the problem of encoding a graph with n vertices and m edges compactly supporting adjacency, neighborhood and degree queries in constant time in the log n-bit ...
Arash Farzan, J. Ian Munro
DPHOTO
2010
176views Hardware» more  DPHOTO 2010»
15 years 3 months ago
Low-cost space-varying FIR filter architecture for computational imaging systems
Recent research demonstrates the advantage of designing electro-optical imaging systems by jointly optimizing the optical and digital subsystems. The optical systems designed usin...
Guotong Feng, Mohammed Shoaib, Edward L. Schwartz,...
BMCBI
2010
132views more  BMCBI 2010»
15 years 2 months ago
Protein docking by Rotation-Based Uniform Sampling (RotBUS) with fast computing of intermolecular contact distance and residue d
Background: Protein-protein interactions are fundamental for the majority of cellular processes and their study is of enormous biotechnological and therapeutic interest. In recent...
Albert Solernou, Juan Fernández-Recio
BMCBI
2007
146views more  BMCBI 2007»
15 years 2 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2008
124views more  BMCBI 2008»
15 years 2 months ago
A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays
Background: Microarray pre-processing usually consists of normalization and summarization. Normalization aims to remove non-biological variations across different arrays. The norm...
Huanying Ge, Chao Cheng, Lei M. Li