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BMCBI
2004
117views more  BMCBI 2004»
15 years 7 months ago
CisOrtho: A program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting
Background: All known genomes code for a large number of transcription factors. It is important to develop methods that will reveal how these transcription factors act on a genome...
Henry R. Bigelow, Adam S. Wenick, Allan Wong, Oliv...
BMCBI
2011
15 years 2 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...
ICFP
2005
ACM
16 years 7 months ago
Monadic augment and generalised short cut fusion
Monads are commonplace programming devices that are used to uniformly structure computations with effects such as state, exceptions, and I/O. This paper further develops the monad...
Neil Ghani, Patricia Johann, Tarmo Uustalu, Varmo ...
FCCM
2008
IEEE
212views VLSI» more  FCCM 2008»
16 years 1 months ago
Map-reduce as a Programming Model for Custom Computing Machines
The map-reduce model requires users to express their problem in terms of a map function that processes single records in a stream, and a reduce function that merges all mapped out...
Jackson H. C. Yeung, C. C. Tsang, Kuen Hung Tsoi, ...
PPSN
2004
Springer
16 years 12 days ago
An Evolutionary Approach to Modeling Radial Brightness Distributions in Elliptical Galaxies
A reasonably good description of the luminosity profiles of galaxies is needed as it serves as a guide towards understanding the process of galaxy formation and evolution. To obtai...
Jin Li, Xin Yao, Colin Frayn, Habib G. Khosroshahi...