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RECOMB
2004
Springer
15 years 10 months ago
Probabilistic discovery of overlapping cellular processes and their regulation
In this paper, we explore modeling overlapping biological processes. We discuss a probabilistic model of overlapping biological processes, gene membership in those processes, and ...
Alexis Battle, Eran Segal, Daphne Koller
RECOMB
2003
Springer
15 years 10 months ago
On de novo interpretation of tandem mass spectra for peptide identification
The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder...
Vineet Bafna, Nathan Edwards
SIGMOD
2007
ACM
190views Database» more  SIGMOD 2007»
15 years 10 months ago
Map-reduce-merge: simplified relational data processing on large clusters
Map-Reduce is a programming model that enables easy development of scalable parallel applications to process vast amounts of data on large clusters of commodity machines. Through ...
Hung-chih Yang, Ali Dasdan, Ruey-Lung Hsiao, Dougl...
SIGMOD
2004
ACM
166views Database» more  SIGMOD 2004»
15 years 10 months ago
Fast Computation of Database Operations using Graphics Processors
We present new algorithms on commodity graphics processors to perform fast computation of several common database operations. Specifically, we consider operations such as conjunct...
Naga K. Govindaraju, Brandon Lloyd, Wei Wang 0010,...
ICSE
2005
IEEE-ACM
15 years 10 months ago
An empirical evaluation of test case filtering techniques based on exercising complex information flows
Some software defects trigger failures only when certain complex information flows occur within the software. Profiling and analyzing such flows therefore provides a potentially i...
David Leon, Wes Masri, Andy Podgurski