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BMCBI
2006
172views more  BMCBI 2006»
14 years 9 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...
SIGMOD
2006
ACM
149views Database» more  SIGMOD 2006»
15 years 9 months ago
Efficient query processing on unstructured tetrahedral meshes
Modern scientific applications consume massive volumes of data produced by computer simulations. Such applications require new data management capabilities in order to scale to te...
Stratos Papadomanolakis, Anastassia Ailamaki, Juli...
BMCBI
2008
166views more  BMCBI 2008»
14 years 9 months ago
Biclustering via optimal re-ordering of data matrices in systems biology: rigorous methods and comparative studies
Background: The analysis of large-scale data sets via clustering techniques is utilized in a number of applications. Biclustering in particular has emerged as an important problem...
Peter A. DiMaggio Jr., Scott R. McAllister, Christ...
ILP
2004
Springer
15 years 3 months ago
Learning an Approximation to Inductive Logic Programming Clause Evaluation
One challenge faced by many Inductive Logic Programming (ILP) systems is poor scalability to problems with large search spaces and many examples. Randomized search methods such as ...
Frank DiMaio, Jude W. Shavlik
77
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ISMB
1993
14 years 11 months ago
Protein Sequencing Experiment Planning Using Analogy
Experiment design and execution is a central activity in the natural sciences. The SeqERsystem provides a general architecture for the integration of automated planning techniques...
Brian P. Kettler, Lindley Darden