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RECOMB
2003
Springer
16 years 22 days ago
Whole-genome comparative annotation and regulatory motif discovery in multiple yeast species
In [13] we reported the genome sequences of S. paradoxus, S. mikatae and S. bayanus and compared these three yeast species to their close relative, S. cerevisiae. Genome-wide comp...
Manolis Kamvysselis, Nick Patterson, Bruce Birren,...
BMCBI
2007
115views more  BMCBI 2007»
15 years 13 days ago
Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...
ECCC
2011
207views ECommerce» more  ECCC 2011»
14 years 7 months ago
Balls and Bins: Smaller Hash Families and Faster Evaluation
A fundamental fact in the analysis of randomized algorithm is that when n balls are hashed into n bins independently and uniformly at random, with high probability each bin contai...
L. Elisa Celis, Omer Reingold, Gil Segev, Udi Wied...
103
Voted
ICS
2009
Tsinghua U.
15 years 7 months ago
Performance modeling and automatic ghost zone optimization for iterative stencil loops on GPUs
Iterative stencil loops (ISLs) are used in many applications and tiling is a well-known technique to localize their computation. When ISLs are tiled across a parallel architecture...
Jiayuan Meng, Kevin Skadron
142
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VISSYM
2004
15 years 1 months ago
Interactively Visualizing Procedurally Encoded Scalar Fields
Figure 1: RBF reconstruction of unstructured CFD data. (a) Volume rendering of 1,943,383 tetrahedral shock data set using 2,932 RBF functions. (b) Volume rendering of a 156,642 te...
Yun Jang, Manfred Weiler, Matthias Hopf, Jingshu H...