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BMCBI
2005
138views more  BMCBI 2005»
14 years 9 months ago
Detailed protein sequence alignment based on Spectral Similarity Score (SSS)
Background: The chemical property and biological function of a protein is a direct consequence of its primary structure. Several algorithms have been developed which determine ali...
Kshitiz Gupta, Dina Thomas, S. V. Vidya, K. V. Ven...
BMCBI
2007
134views more  BMCBI 2007»
14 years 9 months ago
Automatic generation of 3D motifs for classification of protein binding sites
Background: Since many of the new protein structures delivered by high-throughput processes do not have any known function, there is a need for structure-based prediction of prote...
Jean-Christophe Nebel, Pawel Herzyk, David R. Gilb...
ASPDAC
2007
ACM
89views Hardware» more  ASPDAC 2007»
15 years 1 months ago
Trace Compaction using SAT-based Reachability Analysis
In today's designs, when functional verification fails, engineers perform debugging using the provided error traces. Reducing the length of error traces can help the debugging...
Sean Safarpour, Andreas G. Veneris, Hratch Mangass...
SEFM
2005
IEEE
15 years 3 months ago
Description Logics for Shape Analysis
Verification of programs requires reasoning about sets of program states. In case of programs manipulating pointers, program states are pointer graphs. Verification of such prog...
Lilia Georgieva, Patrick Maier
APSEC
2006
IEEE
15 years 3 months ago
Secrobat: Secure and Robust Component-based Architectures
Software systems, component-based systems (CBS) in particular, have a lot of vulnerabilities that may be exploited by intruders. Companies spend much time and money to “patch”...
Artem Vorobiev, Jun Han