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129
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BMCBI
2007
167views more  BMCBI 2007»
15 years 16 days ago
A stochastic differential equation model for transcriptional regulatory networks
Background: This work explores the quantitative characteristics of the local transcriptional regulatory network based on the availability of time dependent gene expression data se...
Adriana Climescu-Haulica, Michelle D. Quirk
83
Voted
ECCC
2007
122views more  ECCC 2007»
15 years 14 days ago
Infeasibility of Instance Compression and Succinct PCPs for NP
The OR-SAT problem asks, given Boolean formulae φ1, . . . , φm each of size at most n, whether at least one of the φi’s is satisfiable. We show that there is no reduction fr...
Lance Fortnow, Rahul Santhanam
107
Voted
MICRO
2006
IEEE
94views Hardware» more  MICRO 2006»
15 years 14 days ago
A Sampling Method Focusing on Practicality
In the past few years, several research works have demonstrated that sampling can drastically speed up architecture simulation, and several of these sampling techniques are already...
Daniel Gracia Pérez, Hugues Berry, Olivier ...
BMCBI
2005
132views more  BMCBI 2005»
15 years 12 days ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
131
Voted
BMCBI
2005
97views more  BMCBI 2005»
15 years 12 days ago
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data
Background: As genomes evolve after speciation, gene content, coding sequence, gene expression, and splicing all diverge with time from ancestors with close relatives. A minimum e...
Roald Rossnes, Ingvar Eidhammer, David A. Liberles
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