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SIGCOMM
2010
ACM
15 years 4 months ago
NapSAC: design and implementation of a power-proportional web cluster
Energy consumption is a major and costly problem in data centers. A large fraction of this energy goes to powering idle machines that are not doing any useful work. We identify tw...
Andrew Krioukov, Prashanth Mohan, Sara Alspaugh, L...
BMCBI
2010
189views more  BMCBI 2010»
15 years 4 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
BMCBI
2008
211views more  BMCBI 2008»
15 years 4 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
BMCBI
2008
122views more  BMCBI 2008»
15 years 4 months ago
A practical comparison of two K-Means clustering algorithms
Background: Data clustering is a powerful technique for identifying data with similar characteristics, such as genes with similar expression patterns. However, not all implementat...
Gregory A. Wilkin, Xiuzhen Huang
CORR
2010
Springer
128views Education» more  CORR 2010»
15 years 4 months ago
A Performance Study of GA and LSH in Multiprocessor Job Scheduling
Multiprocessor task scheduling is an important and computationally difficult problem. This paper proposes a comparison study of genetic algorithm and list scheduling algorithm. Bo...
S. R. Vijayalakshmi, G. Padmavathi
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