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» Fundamentals of Generic Programming
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TCBB
2008
122views more  TCBB 2008»
14 years 9 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
COR
2002
90views more  COR 2002»
14 years 9 months ago
Extremist vs. centrist decision behavior: quasi-convex utility functions for interactive multi-objective linear programming prob
This paper presents the fundamental theory and algorithms for identifying the most preferred alternative for a decision maker (DM) having a non-centrist (or extremist) preferentia...
Behnam Malakooti, Jumah E. Al-alwani
TPDS
2010
93views more  TPDS 2010»
14 years 8 months ago
On the Interplay of Parallelization, Program Performance, and Energy Consumption
—This paper derives simple, yet fundamental formulas to describe the interplay between parallelism of an application, program performance, and energy consumption. Given the ratio...
Sangyeun Cho, Rami G. Melhem
PVM
2010
Springer
14 years 7 months ago
Efficient MPI Support for Advanced Hybrid Programming Models
The number of multithreaded Message Passing Interface (MPI) implementations and applications is increasing rapidly. We discuss how multithreaded applications can receive messages o...
Torsten Hoefler, Greg Bronevetsky, Brian Barrett, ...
PPOPP
2011
ACM
14 years 21 days ago
ScalaExtrap: trace-based communication extrapolation for spmd programs
Performance modeling for scientific applications is important for assessing potential application performance and systems procurement in high-performance computing (HPC). Recent ...
Xing Wu, Frank Mueller