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IPPS
2010
IEEE
14 years 9 months ago
Parallelization of tau-leap coarse-grained Monte Carlo simulations on GPUs
The Coarse-Grained Monte Carlo (CGMC) method is a multi-scale stochastic mathematical and simulation framework for spatially distributed systems. CGMC simulations are important too...
Lifan Xu, Michela Taufer, Stuart Collins, Dionisio...
CCGRID
2008
IEEE
15 years 6 months ago
Xen-Based HPC: A Parallel I/O Perspective
Virtualization using Xen-based virtual machine environment has yet to permeate the field of high performance computing (HPC). One major requirement for HPC is the availability of ...
Weikuan Yu, Jeffrey S. Vetter
CLUSTER
2006
IEEE
15 years 5 months ago
A Parallel Algorithm for the Solution of the Deconvolution Problem on Heterogeneous Networks
In this work we present a parallel algorithm for the solution of a least squares problem with structured matrices. This problem arises in many applications mainly related to digit...
Pedro Alonso, Antonio M. Vidal, Alexey L. Lastovet...
CLUSTER
2006
IEEE
15 years 5 months ago
Cluster-based IP Router: Implementation and Evaluation
IP routers are now increasingly expected to do more than just traditional packet forwarding – they must be extensible as well as scalable. It is a challenge to design a router a...
Qinghua Ye, Mike H. MacGregor
CBMS
2005
IEEE
15 years 5 months ago
A High-Throughput Bioinformatics Distributed Computing Platform
In the past number of years the demand for high performance computing has greatly increased in the area of bioinformatics. The huge increase in size of many genomic databases has ...
Thomas M. Keane, Andrew J. Page, James O. McInerne...