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ISMB
1993
14 years 10 months ago
Knowledge Discovery in GENBANK
Wedescribe various methods designed to discover knowledge in the GenBanknucleic acid sequence database. Using a grammatical model of gene structure, we create a parse tree of a ge...
Jeffery S. Aaronson, Juergen Haas, G. Christian Ov...
JCB
2007
106views more  JCB 2007»
14 years 9 months ago
Clustered Sequence Representation for Fast Homology Search
We present a novel approach to managing redundancy in sequence databanks such as GenBank. We store clusters of near-identical sequences as a representative union-sequence and a se...
Michael Cameron, Yaniv Bernstein, Hugh E. Williams
NAR
2007
145views more  NAR 2007»
14 years 9 months ago
FLAN: a web server for influenza virus genome annotation
FLAN (short for FLu ANnotation), the NCBI web server for genome annotation of influenza virus (http://www.ncbi.nlm.nih.gov/genomes/FLU/ Database/annotation.cgi) is a tool for user...
Yiming Bao, Pavel Bolotov, Dmitry Dernovoy, Boris ...
WOB
2004
102views Bioinformatics» more  WOB 2004»
14 years 11 months ago
An Agent-Based System for Re-annotation of Genomes
Genome annotation projects may produce wrong results since they may be based on obsolete data or wrong models. This work aims to develop an automatic re-annotation system that use ...
Leonardo Vianna do Nascimento, Ana L. C. Bazzan
ISMB
1996
14 years 10 months ago
Improving the Quality of Automatic DNA Sequence Assembly Using Fluorescent Trace-Data Classifications
Virtually all large-scale sequencing projects use automatic sequence-assembly programs to aid in the determination of DNA sequences. The computer-generated assemblies require subs...
Carolyn F. Allex, Schuyler F. Baldwin, Jude W. Sha...