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BMCBI
2010
129views more  BMCBI 2010»
14 years 11 months ago
A temporal precedence based clustering method for gene expression microarray data
Background: Time-course microarray experiments can produce useful data which can help in understanding the underlying dynamics of the system. Clustering is an important stage in m...
Ritesh Krishna, Chang-Tsun Li, Vicky Buchanan-Woll...
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
14 years 11 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
BMCBI
2008
147views more  BMCBI 2008»
14 years 11 months ago
Simple integrative preprocessing preserves what is shared in data sources
Background: Bioinformatics data analysis toolbox needs general-purpose, fast and easily interpretable preprocessing tools that perform data integration during exploratory data ana...
Abhishek Tripathi, Arto Klami, Samuel Kaski
BMCBI
2010
208views more  BMCBI 2010»
14 years 11 months ago
Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene
Background: Image analysis is an essential component in many biological experiments that study gene expression, cell cycle progression, and protein localization. A protocol for tr...
Zafer Aydin, John I. Murray, Robert H. Waterston, ...
ICPR
2004
IEEE
16 years 4 days ago
Classification Probability Analysis of Principal Component Null Space Analysis
In a previous paper [1], we have presented a new linear classification algorithm, Principal Component Null Space Analysis (PCNSA) which is designed for problems like object recogn...
Namrata Vaswani, Rama Chellappa