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    » Gene Expression Data Management: A Case Study
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    RECOMB
    2008
    Springer
    158views Computational Biology» more  RECOMB 2008»
    Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles
    15 years 10 months ago
    Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles
    Download  acgt.cs.tau.ac.il
    We present a method for identifying connected gene subnetworks significantly enriched for genes that are dysregulated in specimens of a disease. These subnetworks provide a signat...
    Igor Ulitsky, Richard M. Karp, Ron Shamir
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    BMCBI
    2007
    126views more  BMCBI 2007»
    Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
    14 years 9 months ago
    Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
    Download  www.biomedcentral.com
    Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
    Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    14 years 9 months ago
    Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana
    Download  www.biomedcentral.com
    Background: The central role of transcription factors (TFs) in higher eukaryotes has led to much interest in deciphering transcriptional regulatory interactions. Even in the best ...
    Henning Redestig, Daniel Weicht, Joachim Selbig, M...
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    BMCBI
    2006
    126views more  BMCBI 2006»
    Differential prioritization between relevance and redundancy in correlation-based feature selection techniques for multiclass ge
    14 years 9 months ago
    Differential prioritization between relevance and redundancy in correlation-based feature selection techniques for multiclass ge
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    Background: Due to the large number of genes in a typical microarray dataset, feature selection looks set to play an important role in reducing noise and computational cost in gen...
    Chia Huey Ooi, Madhu Chetty, Shyh Wei Teng
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    ACSC
    2009
    IEEE
    204views Theoretical Computer Science» more  ACSC 2009»
    Inference of Gene Expression Networks Using Memetic Gene Expression Programming
    15 years 4 months ago
    Inference of Gene Expression Networks Using Memetic Gene Expression Programming
    Download  crpit.com
    In this paper we aim to infer a model of genetic networks from time series data of gene expression profiles by using a new gene expression programming algorithm. Gene expression n...
    Armita Zarnegar, Peter Vamplew, Andrew Stranieri
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