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» Gene function prediction using labeled and unlabeled data
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EMMCVPR
2011
Springer
13 years 10 months ago
Optimization of Robust Loss Functions for Weakly-Labeled Image Taxonomies: An ImageNet Case Study
The recently proposed ImageNet dataset consists of several million images, each annotated with a single object category. However, these annotations may be imperfect, in the sense t...
Julian John McAuley, Arnau Ramisa, Tibério ...
89
Voted
BMCBI
2006
120views more  BMCBI 2006»
14 years 10 months ago
A factor analysis model for functional genomics
Background: Expression array data are used to predict biological functions of uncharacterized genes by comparing their expression profiles to those of characterized genes. While b...
Rafal Kustra, Romy Shioda, Mu Zhu
BMCBI
2005
84views more  BMCBI 2005»
14 years 10 months ago
A method of precise mRNA/DNA homology-based gene structure prediction
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
Alexander G. Churbanov, Mark Pauley, Daniel Quest,...
BMCBI
2004
115views more  BMCBI 2004»
14 years 10 months ago
Quantifying the relationship between co-expression, co-regulation and gene function
Background: It is thought that genes with similar patterns of mRNA expression and genes with similar functions are likely to be regulated via the same mechanisms. It has been diff...
Dominic J. Allocco, Isaac S. Kohane, Atul J. Butte
BMCBI
2010
139views more  BMCBI 2010»
14 years 10 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...