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» Gene functional classification from heterogeneous data
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ICFP
2010
ACM
14 years 10 months ago
Instance chains: type class programming without overlapping instances
Type classes have found a wide variety of uses in Haskell programs, from simple overloading of operators (such as equality or ordering) to complex invariants used to implement typ...
J. Garrett Morris, Mark P. Jones
81
Voted
ICANNGA
2007
Springer
100views Algorithms» more  ICANNGA 2007»
15 years 1 months ago
Softening Splits in Decision Trees Using Simulated Annealing
Predictions computed by a classification tree are usually constant on axis-parallel hyperrectangles corresponding to the leaves and have strict jumps on their boundaries. The densi...
Jakub Dvorák, Petr Savický
BIODATAMINING
2008
96views more  BIODATAMINING 2008»
14 years 9 months ago
Fast approximate hierarchical clustering using similarity heuristics
Background: Agglomerative hierarchical clustering (AHC) is a common unsupervised data analysis technique used in several biological applications. Standard AHC methods require that...
Meelis Kull, Jaak Vilo
BMCBI
2008
107views more  BMCBI 2008»
14 years 9 months ago
Probe-specific mixed-model approach to detect copy number differences using multiplex ligation-dependent probe amplification (ML
Background: MLPA method is a potentially useful semi-quantitative method to detect copy number alterations in targeted regions. In this paper, we propose a method for the normaliz...
Juan R. González, Josep L. Carrasco, Llu&ia...
76
Voted
BMCBI
2004
122views more  BMCBI 2004»
14 years 9 months ago
A comprehensive comparison of comparative RNA structure prediction approaches
Background: An increasing number of researchers have released novel RNA structure analysis and prediction algorithms for comparative approaches to structure prediction. Yet, indep...
Paul P. Gardner, Robert Giegerich