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» Gene functional classification from heterogeneous data
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BMCBI
2010
133views more  BMCBI 2010»
14 years 10 months ago
New components of the Dictyostelium PKA pathway revealed by Bayesian analysis of expression data
Background: Identifying candidate genes in genetic networks is important for understanding regulation and biological function. Large gene expression datasets contain relevant info...
Anup Parikh, Eryong Huang, Christopher Dinh, Blaz ...
BMCBI
2010
155views more  BMCBI 2010»
14 years 10 months ago
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
Background: In the study of cancer genomics, gene expression microarrays, which measure thousands of genes in a single assay, provide abundant information for the investigation of...
Fan Shi, Christopher Leckie, Geoff MacIntyre, Izha...
BMCBI
2006
166views more  BMCBI 2006»
14 years 10 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
BMCBI
2010
147views more  BMCBI 2010»
14 years 10 months ago
Indirect two-sided relative ranking: a robust similarity measure for gene expression data
Background: There is a large amount of gene expression data that exists in the public domain. This data has been generated under a variety of experimental conditions. Unfortunatel...
Louis Licamele, Lise Getoor
ICDM
2010
IEEE
226views Data Mining» more  ICDM 2010»
14 years 7 months ago
Edge Weight Regularization over Multiple Graphs for Similarity Learning
The growth of the web has directly influenced the increase in the availability of relational data. One of the key problems in mining such data is computing the similarity between o...
Pradeep Muthukrishnan, Dragomir R. Radev, Qiaozhu ...