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» Gene functional classification from heterogeneous data
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BMCBI
2008
167views more  BMCBI 2008»
14 years 10 months ago
Not proper ROC curves as new tool for the analysis of differentially expressed genes in microarray experiments
Background: Most microarray experiments are carried out with the purpose of identifying genes whose expression varies in relation with specific conditions or in response to enviro...
Stefano Parodi, Vito Pistoia, Marco Muselli
NAR
2006
82views more  NAR 2006»
14 years 9 months ago
The RCSB PDB information portal for structural genomics
10 The RCSB Protein Data Bank (PDB) offers online tools, summary reports and target information related to the worldwide structural genomics initiatives from its portal at http://...
Andrei Kouranov, Lei Xie, Joanna de la Cruz, Li Ch...
BMCBI
2005
292views more  BMCBI 2005»
14 years 9 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
BMCBI
2007
120views more  BMCBI 2007»
14 years 10 months ago
Recognition of interferon-inducible sites, promoters, and enhancers
Background: Computational analysis of gene regulatory regions is important for prediction of functions of many uncharacterized genes. With this in mind, search of the target genes...
Elena A. Ananko, Yury V. Kondrakhin, Tatyana I. Me...
PAKDD
2007
ACM
110views Data Mining» more  PAKDD 2007»
15 years 4 months ago
Combining Convolution Kernels Defined on Heterogeneous Sub-structures
Convolution kernels, constructed by convolution of sub-kernels defined on sub-structures of composite objects, are widely used in classification, where one important issue is to ch...
Minlie Huang, Xiaoyan Zhu