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BMCBI
2006
105views more  BMCBI 2006»
15 years 1 months ago
Integrative investigation of metabolic and transcriptomic data
Background: New analysis methods are being developed to integrate data from transcriptome, proteome, interactome, metabolome, and other investigative approaches. At the same time,...
Pinar Pir, Betül Kirdar, Andrew Hayes, Z. Ils...
DATE
2009
IEEE
87views Hardware» more  DATE 2009»
15 years 8 months ago
Efficient compression and handling of current source model library waveforms
—This paper describes a waveform compression technique suitable for the efficient utilization, storage and interchange of the emerging current source model (CSM) based cell libra...
Safar Hatami, Peter Feldmann, Soroush Abbaspour, M...
BMCBI
2008
128views more  BMCBI 2008»
15 years 1 months ago
An efficient visualization tool for the analysis of protein mutation matrices
Background: It is useful to develop a tool that would effectively describe protein mutation matrices specifically geared towards the identification of mutations that produce eithe...
Maria Pamela C. David, Carlo M. Lapid, Vincent Ric...
BMCBI
2008
111views more  BMCBI 2008»
15 years 1 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
BMCBI
2006
108views more  BMCBI 2006»
15 years 1 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner