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» Gene set analysis using principal components
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CIVR
2007
Springer
103views Image Analysis» more  CIVR 2007»
15 years 7 months ago
The value of stories for speech-based video search
Anecdotal evidence suggests that story-level information is important for the speech component of video retrieval. In this paper we perform a systematic examination of the combina...
Bouke Huurnink, Maarten de Rijke
BMCBI
2006
114views more  BMCBI 2006»
15 years 1 months ago
BLISS: biding site level identification of shared signal-modules in DNA regulatory sequences
Background: Regulatory modules are segments of the DNA that control particular aspects of gene expression. Their identification is therefore of great importance to the field of mo...
Hailong Meng, Arunava Banerjee, Lei Zhou
BMCBI
2010
202views more  BMCBI 2010»
15 years 1 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
BMCBI
2008
153views more  BMCBI 2008»
15 years 1 months ago
Estimating the size of the solution space of metabolic networks
Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
Alfredo Braunstein, Roberto Mulet, Andrea Pagnani
BMCBI
2008
117views more  BMCBI 2008»
15 years 1 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...