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» Gene-set approach for expression pattern analysis
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BMCBI
2007
156views more  BMCBI 2007»
14 years 9 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
BMCBI
2010
183views more  BMCBI 2010»
14 years 7 months ago
The complexity of gene expression dynamics revealed by permutation entropy
Background: High complexity is considered a hallmark of living systems. Here we investigate the complexity of temporal gene expression patterns using the concept of Permutation En...
Xiaoliang Sun, Yong Zou, Victoria J. Nikiforova, J...
BMCBI
2007
182views more  BMCBI 2007»
14 years 9 months ago
EDISA: extracting biclusters from multiple time-series of gene expression profiles
Background: Cells dynamically adapt their gene expression patterns in response to various stimuli. This response is orchestrated into a number of gene expression modules consistin...
Jochen Supper, Martin Strauch, Dierk Wanke, Klaus ...
KDD
2003
ACM
190views Data Mining» more  KDD 2003»
15 years 10 months ago
Distance-enhanced association rules for gene expression
We introduce a novel data mining technique for the analysis of gene expression. Gene expression is the effective production of the protein that a gene encodes. We focus on the cha...
Aleksandar Icev, Carolina Ruiz, Elizabeth F. Ryder
113
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CIARP
2011
Springer
13 years 9 months ago
Sentiment-Preserving Reduction for Social Media Analysis
Abstract. In this paper, we address the problem of opinion analysis using a probabilistic approach to the underlying structure of different types of opinions or sentiments around ...
Sergio Hernández, Philip Sallis