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KI
2005
Springer
15 years 7 months ago
Dependency Calculus: Reasoning in a General Point Relation Algebra
The point algebra is a fundamental formal calculus for spatial and temporal reasoning. We present a new generalization that meets all requirements to describe dependencies on netw...
Marco Ragni, Alexander Scivos
BMCBI
2010
115views more  BMCBI 2010»
15 years 2 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
BMCBI
2007
107views more  BMCBI 2007»
15 years 2 months ago
A general and efficient method for estimating continuous IBD functions for use in genome scans for QTL
Background: Identity by descent (IBD) matrix estimation is a central component in mapping of Quantitative Trait Loci (QTL) using variance component models. A large number of algor...
Francois Besnier, Örjan Carlborg
130
Voted
BMCBI
2006
160views more  BMCBI 2006»
15 years 1 months ago
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Mario Stanke, Oliver Schöffmann, Burkhard Mor...
BMCBI
2008
135views more  BMCBI 2008»
15 years 2 months ago
Using Generalized Procrustes Analysis (GPA) for normalization of cDNA microarray data
Background: Normalization is essential in dual-labelled microarray data analysis to remove nonbiological variations and systematic biases. Many normalization methods have been use...
Huiling Xiong, Dapeng Zhang, Christopher J. Martyn...