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WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
15 years 10 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
BMCBI
2010
121views more  BMCBI 2010»
15 years 3 months ago
A Markov blanket-based method for detecting causal SNPs in GWAS
Background: Detecting epistatic interactions associated with complex and common diseases can help to improve prevention, diagnosis and treatment of these diseases. With the develo...
Bing Han, Meeyoung Park, Xue-wen Chen
KDD
2004
ACM
112views Data Mining» more  KDD 2004»
16 years 3 months ago
A rank sum test method for informative gene discovery
Finding informative genes from microarray data is an important research problem in bioinformatics research and applications. Most of the existing methods rank features according t...
Lin Deng, Jian Pei, Jinwen Ma, Dik Lun Lee
BMCBI
2005
87views more  BMCBI 2005»
15 years 3 months ago
ProfNet, a method to derive profile-profile alignment scoring functions that improves the alignments of distantly related protei
Background: Profile-profile methods have been used for some years now to detect and align homologous proteins. The best such methods use information from the background distributi...
Tomas Ohlson, Arne Elofsson
BMCBI
2008
117views more  BMCBI 2008»
15 years 3 months ago
New resampling method for evaluating stability of clusters
Background: Hierarchical clustering is a widely applied tool in the analysis of microarray gene expression data. The assessment of cluster stability is a major challenge in cluste...
Irina Gana Dresen, Tanja Boes, Johannes Hüsin...