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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Open Microscopy Environment
High-throughput scoring of image-based biological assays heavily depends on the extraction of quantitative numerical information from microscopy images. This paper describes how t...
Ilya G. Goldberg
BMCBI
2006
113views more  BMCBI 2006»
14 years 9 months ago
GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima
Background: Computational discovery of transcription factor binding sites (TFBS) is a challenging but important problem of bioinformatics. In this study, improvement of a Gibbs sa...
Kazuhito Shida
ICDE
2012
IEEE
228views Database» more  ICDE 2012»
12 years 12 months ago
A General Method for Estimating Correlated Aggregates over a Data Stream
—On a stream of two dimensional data items (x, y) where x is an item identifier, and y is a numerical attribute, a correlated aggregate query requires us to first apply a selec...
Srikanta Tirthapura, David P. Woodruff
BIOINFORMATICS
2006
120views more  BIOINFORMATICS 2006»
14 years 9 months ago
Comparison of Affymetrix GeneChip expression measures
Motivation: In the Affymetrix GeneChip system, preprocessing occurs before one obtains expression level measurements. Because the number of competing preprocessing methods was lar...
Rafael A. Irizarry, Zhijin Wu, Harris A. Jaffee
BMCBI
2008
60views more  BMCBI 2008»
14 years 9 months ago
A permutation-based method to identify loss-of-heterozygosity using paired genotype microarray data
ent> <title> <p>UT-ORNL-KBRIN Bioinformatics Summit 2008</p> </title> <editor>Eric C Rouchka and Julia Krushkal</editor> <note>Meeting ...
Stan Pounds, Cheng Cheng, Wenjian Yang, Arzu Onar,...