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AMC
2005
168views more  AMC 2005»
15 years 3 months ago
Comparison between the homotopy analysis method and homotopy perturbation method
In this paper, we show that the so-called ``homotopy perturbation method'' is only a special case of the homotopy analysis method. Both methods are in principle based on...
Shijun Liao
144
Voted
BMCBI
2006
160views more  BMCBI 2006»
15 years 3 months ago
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
Background: In order to improve gene prediction, extrinsic evidence on the gene structure can be collected from various sources of information such as genome-genome comparisons an...
Mario Stanke, Oliver Schöffmann, Burkhard Mor...
139
Voted
ISBRA
2009
Springer
15 years 10 months ago
Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks
Identifying gene regulatory networks from high-throughput gene expression data is one of the most important goals of bioinformatics, but it remains difficult to define what makes a...
Peter Larsen, Yang Dai
122
Voted
CSB
2004
IEEE
115views Bioinformatics» more  CSB 2004»
15 years 7 months ago
PoPS: A Computational Tool for Modeling and Predicting Protease Specificity
Proteases play a fundamental role in the control of intra- and extracellular processes by binding and cleaving specific amino acid sequences. Identifying these targets is extremel...
Sarah E. Boyd, Maria J. García de la Banda,...
BIOINFORMATICS
2010
84views more  BIOINFORMATICS 2010»
15 years 3 months ago
partDSA: deletion/substitution/addition algorithm for partitioning the covariate space in prediction
The partDSA package (Molinaro, Lostritto, and Weston 2009) provides a novel recursive partitioning tool for prediction when numerous variables jointly affect the outcome. In such ...
Annette M. Molinaro, Karen Lostritto, Mark J. van ...