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BMCBI
2010
105views more  BMCBI 2010»
15 years 5 months ago
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement
Background: The Medium-chain Dehydrogenases/Reductases (MDR) form a protein superfamily whose size and complexity defeats traditional means of subclassification; it currently has ...
Joel Hedlund, Hans Jörnvall, Bengt Persson
BMCBI
2007
105views more  BMCBI 2007»
15 years 5 months ago
Generating confidence intervals on biological networks
Background: In the analysis of networks we frequently require the statistical significance of some network statistic, such as measures of similarity for the properties of interact...
Thomas Thorne, Michael P. H. Stumpf
BMCBI
2007
179views more  BMCBI 2007»
15 years 5 months ago
Automated smoother for the numerical decoupling of dynamics models
Background: Structure identification of dynamic models for complex biological systems is the cornerstone of their reverse engineering. Biochemical Systems Theory (BST) offers a pa...
Marco Vilela, Carlos Cristiano H. Borges, Susana V...
BMCBI
2008
128views more  BMCBI 2008»
15 years 5 months ago
Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor bindin
Background: Biologically active sequence motifs often have positional preferences with respect to a genomic landmark. For example, many known transcription factor binding sites (T...
Nak-Kyeong Kim, Kannan Tharakaraman, Leonardo Mari...
CORR
2010
Springer
148views Education» more  CORR 2010»
15 years 5 months ago
Low Rate Sampling of Pulse Streams with Application to Ultrasound Imaging
Signals comprised of a stream of short pulses appear in many applications including bio-imaging, radar, and ultrawideband communication. Recently, a new framework, referred to as f...
Ronen Tur, Yonina C. Eldar, Zvi Friedman
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