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» Generalization Methods in Bioinformatics
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SAC
2009
ACM
15 years 11 months ago
Capturing truthiness: mining truth tables in binary datasets
We introduce a new data mining problem: mining truth tables in binary datasets. Given a matrix of objects and the properties they satisfy, a truth table identifies a subset of pr...
Clifford Conley Owens III, T. M. Murali, Naren Ram...
BIRD
2007
Springer
15 years 10 months ago
Analysing Periodic Phenomena by Circular PCA
Experimental time courses often reveal a nonlinear behaviour. Analysing these nonlinearities is even more challenging when the observed phenomenon is cyclic or oscillatory. This me...
Matthias Scholz
BIBE
2005
IEEE
115views Bioinformatics» more  BIBE 2005»
15 years 10 months ago
GOMIT: A Generic and Adaptive Annotation Algorithm Based on Gene Ontology Term Distributions
We address the issue of providing highly informative annotations using information revealed by the structured vocabularies of Gene Ontology (GO). For a target, a set of candidate ...
In-Yee Lee, Jan-Ming Ho, Ming-Syan Chen
CSB
2005
IEEE
118views Bioinformatics» more  CSB 2005»
15 years 10 months ago
Gene Teams with Relaxed Proximity Constraint
Functionally related genes co-evolve, probably due to the strong selection pressure in evolution. Thus we expect that they are present in multiple genomes. Physical proximity amon...
Sun Kim, Jeong-Hyeon Choi, Jiong Yang
CSB
2005
IEEE
143views Bioinformatics» more  CSB 2005»
15 years 10 months ago
Multivariate gene selection: Does it help
When building predictors of disease state based on gene expression data, gene selection is performed in order to achieve a good performance and to identify a relevant subset of ge...
Carmen Lai, Marcel J. T. Reinders