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» Generalization Methods in Bioinformatics
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AAAI
2008
15 years 6 months ago
Clustering on Complex Graphs
Complex graphs, in which multi-type nodes are linked to each other, frequently arise in many important applications, such as Web mining, information retrieval, bioinformatics, and...
Bo Long, Zhongfei (Mark) Zhang, Philip S. Yu, Tian...
ISMDA
2005
Springer
15 years 10 months ago
Extracting Molecular Diversity Between Populations Through Sequence Alignments
The use of sequence alignments for establishing protein homology relationships has an extensive tradition in the field of bioinformatics, and there is an increasing desire for more...
Steinar Thorvaldsen, Tor Flå, Nils Willassen
WABI
2005
Springer
15 years 10 months ago
Improved Maintenance of Molecular Surfaces Using Dynamic Graph Connectivity
We present recent developments in efficiently maintaining the boundary and surface area of protein molecules as they undergo conformational changes. As the method that we devised k...
Eran Eyal, Dan Halperin
WABI
2005
Springer
15 years 10 months ago
Minimum Recombination Histories by Branch and Bound
Recombination plays an important role in creating genetic diversity within species, and inferring past recombination events is central to many problems in genetics. Given a set M o...
Rune B. Lyngsø, Yun S. Song, Jotun Hein
WABI
2004
Springer
107views Bioinformatics» more  WABI 2004»
15 years 10 months ago
Phylogenetic Super-networks from Partial Trees
—In practice, one is often faced with incomplete phylogenetic data, such as a collection of partial trees or partial splits. This paper poses the problem of inferring a phylogene...
Daniel H. Huson, Tobias Dezulian, Tobias H. Kl&oum...