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» Generalization Methods in Bioinformatics
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WABI
2010
Springer
168views Bioinformatics» more  WABI 2010»
15 years 2 months ago
The Complexity of Inferring a Minimally Resolved Phylogenetic Supertree
Abstract. A recursive algorithm by Aho, Sagiv, Szymanski, and Ullman [1] forms the basis for many modern rooted supertree methods employed in Phylogenetics. However, as observed by...
Jesper Jansson, Richard S. Lemence, Andrzej Lingas
BIOINFORMATICS
2012
13 years 7 months ago
SSuMMo: rapid analysis, comparison and visualization of microbial communities
Motivation: Next-generation sequencing methods are generating increasingly massive datasets, yet still do not fully capture genetic diversity in the richest environments. To under...
Alex L. B. Leach, James P. J. Chong, Kelly R. Rede...
151
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BIOINFORMATICS
2012
13 years 7 months ago
MolClass: a web portal to interrogate diverse small molecule screen datasets with different computational models
Summary: The MolClass toolkit and data portal generates computational models from user-defined small molecule datasets based on structural features identified in hit and non-hit m...
Jan Wildenhain, Nicholas FitzGerald, Mike Tyers
151
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IMSCCS
2007
IEEE
15 years 11 months ago
Asymmetric Bagging and Feature Selection for Activities Prediction of Drug Molecules
Background: Activities of drug molecules can be predicted by QSAR (quantitative structure activity relationship) models, which overcomes the disadvantages of high cost and long cy...
Guo-Zheng Li, Hao-Hua Meng, Mary Qu Yang, Jack Y. ...
BIBE
2005
IEEE
121views Bioinformatics» more  BIBE 2005»
15 years 10 months ago
RNA Pseudoknot Prediction Using Term Rewriting
RNA plays a critical role in mediating every step of cellular information transfer from genes to functional proteins. Pseudoknots are widely occurring structural motifs found in a...
Xuezheng Fu, Hao Wang, William L. Harrison, Robert...