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CSB
2003
IEEE
128views Bioinformatics» more  CSB 2003»
15 years 11 months ago
Degenerate Primer Design via Clustering
This paper describes a new strategy for designing degenerate primers for a given multiple alignment of amino acid sequences. Degenerate primers are useful for amplifying homologou...
Xintao Wei, David N. Kuhn, Giri Narasimhan
AI
2003
Springer
15 years 11 months ago
An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem
The prediction of a protein’s structure from its amino-acid sequence is one of the most important problems in computational biology. In the current focus on a widely studied abst...
Alena Shmygelska, Holger H. Hoos
ECML
2006
Springer
15 years 10 months ago
Unsupervised Multiple-Instance Learning for Functional Profiling of Genomic Data
Multiple-instance learning (MIL) is a popular concept among the AI community to support supervised learning applications in situations where only incomplete knowledge is available....
Corneliu Henegar, Karine Clément, Jean-Dani...
SDM
2007
SIAM
182views Data Mining» more  SDM 2007»
15 years 8 months ago
Distance Preserving Dimension Reduction for Manifold Learning
Manifold learning is an effective methodology for extracting nonlinear structures from high-dimensional data with many applications in image analysis, computer vision, text data a...
Hyunsoo Kim, Haesun Park, Hongyuan Zha
CIBCB
2009
IEEE
15 years 7 months ago
Improved prediction of trans-membrane spans in proteins using an artificial neural network
Tools for the identification of trans-membrane spans from the protein sequence are widely used in the experimental community. Computational structural biology seeks to increase the...
Julia Koehler, Ralf Mueller, Jens Meiler