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BMCBI
2010
229views more  BMCBI 2010»
15 years 6 months ago
Mocapy++ - A toolkit for inference and learning in dynamic Bayesian networks
Background: Mocapy++ is a toolkit for parameter learning and inference in dynamic Bayesian networks (DBNs). It supports a wide range of DBN architectures and probability distribut...
Martin Paluszewski, Thomas Hamelryck
BMCBI
2005
162views more  BMCBI 2005»
15 years 6 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
BMCBI
2004
98views more  BMCBI 2004»
15 years 6 months ago
STING Millennium Suite: integrated software for extensive analyses of 3d structures of proteins and their complexes
Background: The integration of many aspects of protein/DNA structure analysis is an important requirement for software products in general area of structural bioinformatics. In fa...
Roberto H. Higa, Roberto C. Togawa, Arnaldo J. Mon...
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SIGMOD
2010
ACM
308views Database» more  SIGMOD 2010»
15 years 5 months ago
GBLENDER: towards blending visual query formulation and query processing in graph databases
Given a graph database D and a query graph g, an exact subgraph matching query asks for the set S of graphs in D that contain g as a subgraph. This type of queries find important...
Changjiu Jin, Sourav S. Bhowmick, Xiaokui Xiao, Ja...
BMCBI
2010
201views more  BMCBI 2010»
15 years 4 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...