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BMCBI
2008
115views more  BMCBI 2008»
15 years 7 months ago
BioGraphE: high-performance bionetwork analysis using the Biological Graph Environment
Background: Graphs and networks are common analysis representations for biological systems. Many traditional graph algorithms such as k-clique, k-coloring, and subgraph matching h...
George Chin Jr., Daniel G. Chavarría-Mirand...
BMCBI
2008
106views more  BMCBI 2008»
15 years 7 months ago
An Integrated Korean Biodiversity and Genetic Information Retrieval System
Background: On-line biodiversity information databases are growing quickly and being integrated into general bioinformatics systems due to the advances of fast gene sequencing tec...
Jeongheui Lim, Jong Bhak, Hee-Mock Oh, Chang-Bae K...
FUIN
2008
136views more  FUIN 2008»
15 years 7 months ago
Multi-Dimensional Relational Sequence Mining
The issue addressed in this paper concerns the discovery of frequent multi-dimensional patterns from relational sequences. The great variety of applications of sequential pattern m...
Floriana Esposito, Nicola Di Mauro, Teresa Maria A...
BMCBI
2006
192views more  BMCBI 2006»
15 years 7 months ago
Analysis of circular genome rearrangement by fusions, fissions and block-interchanges
Background: Analysis of genomes evolving via block-interchange events leads to a combinatorial problem of sorting by block-interchanges, which has been studied recently to evaluat...
Chin Lung Lu, Yen-Lin Huang, Tsui Ching Wang, Hsie...
BMCBI
2007
99views more  BMCBI 2007»
15 years 7 months ago
Towards validating the hypothesis of phylogenetic profiling
Background: As the number of fully sequenced genome increases, the need is greater for bioinformatics to predict or annotate genes of a newly sequenced genome. Ever since Eisenber...
Raja Loganantharaj, Mazen Atwi