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BMCBI
2008
135views more  BMCBI 2008»
15 years 3 months ago
Using Generalized Procrustes Analysis (GPA) for normalization of cDNA microarray data
Background: Normalization is essential in dual-labelled microarray data analysis to remove nonbiological variations and systematic biases. Many normalization methods have been use...
Huiling Xiong, Dapeng Zhang, Christopher J. Martyn...
CIKM
2009
Springer
15 years 9 months ago
Linear predictive coding representation of correlated mutation for protein sequence alignment
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
Chan-seok Jeong, Dongsup Kim
SIAMJO
2002
107views more  SIAMJO 2002»
15 years 2 months ago
A Globally Convergent Augmented Lagrangian Pattern Search Algorithm for Optimization with General Constraints and Simple Bounds
We give a pattern search method for nonlinearly constrained optimization that is an adaption of a bound constrained augmented Lagrangian method first proposed by Conn, Gould, and T...
Robert Michael Lewis, Virginia Torczon
BIBE
2007
IEEE
191views Bioinformatics» more  BIBE 2007»
15 years 9 months ago
PANP - a New Method of Gene Detection on Oligonucleotide Expression Arrays
Abstract. Currently, the method most used for gene detection calls on Affymetrix oligonucleotide arrays is provided as part of the MAS5.0 software. The MAS method uses Wilcoxon sta...
Peter Warren, Deanne Taylor, Paolo G. V. Martini, ...
KDD
2006
ACM
134views Data Mining» more  KDD 2006»
16 years 3 months ago
Is there a grand challenge or X-prize for data mining?
This panel will discuss possible exciting and motivating Grand Challenge problems for Data Mining, focusing on bioinformatics, multimedia mining, link mining, text mining, and web...
Gregory Piatetsky-Shapiro, Robert Grossman, Chaban...