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BIBE
2004
IEEE
115views Bioinformatics» more  BIBE 2004»
15 years 7 months ago
Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets
Current motif discovery methods can only detect individual motifs in groups of protein sequences--they do not discover potentially-interacting motif pairs underlying the interacti...
Soon-Heng Tan, Wing-Kin Sung, See-Kiong Ng
CSB
2004
IEEE
154views Bioinformatics» more  CSB 2004»
15 years 7 months ago
Multi-Knockout Genetic Network Analysis: The Rad6 Example
A novel and rigorous Multi-perturbation Shapley Value Analysis (MSA) method has been recently presented [12]. The method addresses the challenge of defining and calculating the fu...
Alon Kaufman, Martin Kupiec, Eytan Ruppin
PRIB
2010
Springer
192views Bioinformatics» more  PRIB 2010»
15 years 1 months ago
Structured Output Prediction of Anti-cancer Drug Activity
We present a structured output prediction approach for classifying potential anti-cancer drugs. Our QSAR model takes as input a description of a molecule and predicts the activity...
Hongyu Su, Markus Heinonen, Juho Rousu
GRAPHICSINTERFACE
1997
15 years 4 months ago
Multiresolution BSP Trees Applied to Terrain, Transparency, and General Objects
We present a system for incorporating multiple level of detail (LOD) models of 3D objects within a single hierarchical data structure. This system was designed for a scientific vi...
Charles Wiley, A. T. Campbell III, Stephen A. Szyg...
BMCBI
2007
115views more  BMCBI 2007»
15 years 3 months ago
Comparing sequences without using alignments: application to HIV/SIV subtyping
Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...