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» Generalization Methods in Bioinformatics
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BMCBI
2010
108views more  BMCBI 2010»
15 years 20 days ago
Prediction of RNA secondary structure by maximizing pseudo-expected accuracy
Background: Recent studies have revealed the importance of considering the entire distribution of possible secondary structures in RNA secondary structure predictions; therefore, ...
Michiaki Hamada, Kengo Sato, Kiyoshi Asai
BMCBI
2007
173views more  BMCBI 2007»
15 years 3 months ago
Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is a high-throughput assay for DNA-protein-binding or post-translational chromatin/histone modi...
Joern Toedling, Oleg Sklyar, Tammo Krueger, Jenny ...
ICCBR
2007
Springer
15 years 9 months ago
Usages of Generalization in Case-Based Reasoning
The aim of this paper is to analyze how the generalizations built by a CBR method can be used as local approximations of a concept. From this point of view, these local approximati...
Eva Armengol
135
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KDD
2009
ACM
215views Data Mining» more  KDD 2009»
16 years 3 months ago
Large-scale sparse logistic regression
Logistic Regression is a well-known classification method that has been used widely in many applications of data mining, machine learning, computer vision, and bioinformatics. Spa...
Jun Liu, Jianhui Chen, Jieping Ye
BMCBI
2010
96views more  BMCBI 2010»
15 years 3 months ago
ModuleOrganizer: detecting modules in families of transposable elements
Background: Most known eukaryotic genomes contain mobile copied elements called transposable elements. In some species, these elements account for the majority of the genome seque...
Sébastien Tempel, Christine Rousseau, Fariz...