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RECOMB
2006
Springer
15 years 10 months ago
New Methods for Detecting Lineage-Specific Selection
Abstract. So far, most methods for identifying sequences under selection based on comparative sequence data have either assumed selectional pressures are the same across all branch...
Adam C. Siepel, Katherine S. Pollard, David Haussl...
ICCV
2003
IEEE
15 years 3 months ago
Markov-Based Failure Prediction for Human Motion Analysis
This paper presents a new method of detecting and predicting motion tracking failures with applications in human motion and gait analysis. We define a tracking failure as an event...
Shiloh L. Dockstader, Nikita S. Imennov, A. Murat ...
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
15 years 10 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
ML
1998
ACM
139views Machine Learning» more  ML 1998»
14 years 9 months ago
The Hierarchical Hidden Markov Model: Analysis and Applications
We introduce, analyze and demonstrate a recursive hierarchical generalization of the widely used hidden Markov models, which we name Hierarchical Hidden Markov Models (HHMM). Our m...
Shai Fine, Yoram Singer, Naftali Tishby
RECOMB
2007
Springer
15 years 10 months ago
A Feature-Based Approach to Modeling Protein-DNA Interactions
Transcription factor (TF) binding to its DNA target site is a fundamental regulatory interaction. The most common model used to represent TF binding specificities is a position spe...
Eilon Sharon, Eran Segal