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NN
2006
Springer
14 years 9 months ago
Self-organizing neural networks to support the discovery of DNA-binding motifs
Identification of the short DNA sequence motifs that serve as binding targets for transcription factors is an important challenge in bioinformatics. Unsupervised techniques from t...
Shaun Mahony, Panayiotis V. Benos, Terry J. Smith,...
RECOMB
2008
Springer
15 years 10 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
STOC
2004
ACM
61views Algorithms» more  STOC 2004»
15 years 10 months ago
The zero-one principle for switching networks
Recently, approximation analysis has been extensively used to study algorithms for routing weighted packets in various network settings. Although different techniques were applied...
Yossi Azar, Yossi Richter
BMCBI
2010
201views more  BMCBI 2010»
14 years 7 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...
ALT
2003
Springer
15 years 6 months ago
Intrinsic Complexity of Uniform Learning
Inductive inference is concerned with algorithmic learning of recursive functions. In the model of learning in the limit a learner successful for a class of recursive functions mus...
Sandra Zilles