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BMCBI
2010
149views more  BMCBI 2010»
14 years 10 months ago
S3DB core: a framework for RDF generation and management in bioinformatics infrastructures
Background: Biomedical research is set to greatly benefit from the use of semantic web technologies in the design of computational infrastructure. However, beyond well defined res...
Jonas S. Almeida, Helena F. Deus, Wolfgang Maass
ISLPED
2003
ACM
122views Hardware» more  ISLPED 2003»
15 years 3 months ago
A mixed-clock issue queue design for globally asynchronous, locally synchronous processor cores
Ever shrinking device sizes and innovative micro-architectural and circuit design techniques have made it possible to have multi-million transistor systems running at multi-gigahe...
Venkata Syam P. Rapaka, Diana Marculescu
EUROPAR
2010
Springer
14 years 11 months ago
Optimized Dense Matrix Multiplication on a Many-Core Architecture
Abstract. Traditional parallel programming methodologies for improving performance assume cache-based parallel systems. However, new architectures, like the IBM Cyclops-64 (C64), b...
Elkin Garcia, Ioannis E. Venetis, Rishi Khan, Guan...
BMCBI
2010
189views more  BMCBI 2010»
14 years 10 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
IJPP
2011
105views more  IJPP 2011»
14 years 4 months ago
Correlating Radio Astronomy Signals with Many-Core Hardware
A recent development in radio astronomy is to replace traditional dishes with many small antennas. The signals are combined to form one large, virtual telescope. The enormous data ...
Rob van Nieuwpoort, John W. Romein