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BMCBI
2004
125views more  BMCBI 2004»
14 years 11 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...
GECCO
2009
Springer
112views Optimization» more  GECCO 2009»
15 years 6 months ago
Approximating geometric crossover in semantic space
We propose a crossover operator that works with genetic programming trees and is approximately geometric crossover in the semantic space. By defining semantic as program’s eval...
Krzysztof Krawiec, Pawel Lichocki
STOC
2006
ACM
138views Algorithms» more  STOC 2006»
16 years 1 days ago
Searching dynamic point sets in spaces with bounded doubling dimension
We present a new data structure that facilitates approximate nearest neighbor searches on a dynamic set of points in a metric space that has a bounded doubling dimension. Our data...
Richard Cole, Lee-Ad Gottlieb
DGCI
2009
Springer
15 years 3 months ago
A Linear Time and Space Algorithm for Detecting Path Intersection
For discrete sets coded by the Freeman chain describing their contour, several linear algorithms have been designed for determining their shape properties. Most of them are based ...
Srecko Brlek, Michel Koskas, Xavier Provenç...
ICML
2006
IEEE
16 years 16 days ago
Kernelizing the output of tree-based methods
We extend tree-based methods to the prediction of structured outputs using a kernelization of the algorithm that allows one to grow trees as soon as a kernel can be defined on the...
Florence d'Alché-Buc, Louis Wehenkel, Pierr...