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BMCBI
2006
137views more  BMCBI 2006»
14 years 9 months ago
A classification-based framework for predicting and analyzing gene regulatory response
Background: We have recently introduced a predictive framework for studying gene transcriptional regulation in simpler organisms using a novel supervised learning algorithm called...
Anshul Kundaje, Manuel Middendorf, Mihir Shah, Chr...
BMCBI
2006
203views more  BMCBI 2006»
14 years 9 months ago
Independent component analysis reveals new and biologically significant structures in micro array data
Background: An alternative to standard approaches to uncover biologically meaningful structures in micro array data is to treat the data as a blind source separation (BSS) problem...
Attila Frigyesi, Srinivas Veerla, David Lindgren, ...
BMCBI
2006
150views more  BMCBI 2006»
14 years 9 months ago
CGAT: a comparative genome analysis tool for visualizing alignments in the analysis of complex evolutionary changes between clos
Background: The recent accumulation of closely related genomic sequences provides a valuable resource for the elucidation of the evolutionary histories of various organisms. Howev...
Ikuo Uchiyama, Toshio Higuchi, Ichizo Kobayashi
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CCE
2006
14 years 9 months ago
State-of-the-art review of optimization methods for short-term scheduling of batch processes
There has been significant progress in the area of short-term scheduling of batch processes, including the solution of industrial-sized problems, in the last 20 years. The main go...
Carlos A. Méndez, Jaime Cerdá, Ignac...
CORR
2006
Springer
119views Education» more  CORR 2006»
14 years 9 months ago
Clustering and Sharing Incentives in BitTorrent Systems
Peer-to-peer protocols play an increasingly instrumental role in Internet content distribution. It is therefore important to gain a complete understanding of how these protocols b...
Arnaud Legout, Nikitas Liogkas, Eddie Kohler, Lixi...