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BMCBI
2006
130views more  BMCBI 2006»
14 years 9 months ago
Docking protein domains in contact space
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
Stefano Lise, Alice Walker-Taylor, David T. Jones
PPDP
2010
Springer
14 years 8 months ago
Graph queries through datalog optimizations
This paperdescribes the use of a powerful graph query language for querying programs, and a novel combination of transformations for generating efficient implementations of the q...
K. Tuncay Tekle, Michael Gorbovitski, Yanhong A. L...
JAMIA
2010
116views more  JAMIA 2010»
14 years 4 months ago
Extracting Rx information from clinical narrative
Objective The authors used the i2b2 Medication Extraction Challenge to evaluate their entity extraction methods, contribute to the generation of a publicly available collection of...
James G. Mork, Olivier Bodenreider, Dina Demner-Fu...
JMLR
2008
230views more  JMLR 2008»
14 years 9 months ago
Exponentiated Gradient Algorithms for Conditional Random Fields and Max-Margin Markov Networks
Log-linear and maximum-margin models are two commonly-used methods in supervised machine learning, and are frequently used in structured prediction problems. Efficient learning of...
Michael Collins, Amir Globerson, Terry Koo, Xavier...
ER
2010
Springer
154views Database» more  ER 2010»
14 years 8 months ago
Modelling Functional Requirements in Spatial Design
Abstract. We demonstrate the manner in which high-level design requirements, e.g., as they correspond to the commonsensical conceptualisation of expert designers, may be formally s...
Mehul Bhatt, Joana Hois, Oliver Kutz, Frank Dylla