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BMCBI
2008
101views more  BMCBI 2008»
15 years 28 days ago
Reranking candidate gene models with cross-species comparison for improved gene prediction
Background: Most gene finders score candidate gene models with state-based methods, typically HMMs, by combining local properties (coding potential, splice donor and acceptor patt...
Qian Liu, Koby Crammer, Fernando C. N. Pereira, Da...
BMCBI
2010
243views more  BMCBI 2010»
15 years 28 days ago
Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data
Background: Visualization of DNA microarray data in two or three dimensional spaces is an important exploratory analysis step in order to detect quality issues or to generate new ...
Christoph Bartenhagen, Hans-Ulrich Klein, Christia...
BMCBI
2008
158views more  BMCBI 2008»
15 years 28 days ago
Real value prediction of protein solvent accessibility using enhanced PSSM features
Background: Prediction of protein solvent accessibility, also called accessible surface area (ASA) prediction, is an important step for tertiary structure prediction directly from...
Darby Tien-Hao Chang, Hsuan-Yu Huang, Yu-Tang Syu,...
DEBU
2010
88views more  DEBU 2010»
15 years 27 days ago
SECONDO: A Platform for Moving Objects Database Research and for Publishing and Integrating Research Implementations
Databases supporting time dependent and continuously changing geometries, called moving objects databases, have been studied for about 15 years. The field has been flourishing and...
Ralf Hartmut Güting, Thomas Behr, Christian D...
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BIB
2006
172views more  BIB 2006»
15 years 26 days ago
Advances in the Exon-Intron Database (EID)
Investigation of exon^intron gene structures is a non-trivial task due to enormous expansions of the eukaryotic genomes, great variety of gene forms, and the imperfectness in sequ...
Valery Shepelev, Alexei Fedorov