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» Generic Graph Algorithms for Sparse Matrix Ordering
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ICALP
2009
Springer
15 years 9 months ago
Counting Subgraphs via Homomorphisms
We introduce a generic approach for counting subgraphs in a graph. The main idea is to relate counting subgraphs to counting graph homomorphisms. This approach provides new algori...
Omid Amini, Fedor V. Fomin, Saket Saurabh
BMCBI
2010
148views more  BMCBI 2010»
14 years 9 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
IPPS
2008
IEEE
15 years 3 months ago
SNAP, Small-world Network Analysis and Partitioning: An open-source parallel graph framework for the exploration of large-scale
We present SNAP (Small-world Network Analysis and Partitioning), an open-source graph framework for exploratory study and partitioning of large-scale networks. To illustrate the c...
David A. Bader, Kamesh Madduri
CVPR
2011
IEEE
14 years 5 months ago
Multiview Registration via Graph Diffusion of Dual Quaternions
Surface registration is a fundamental step in the reconstruction of three-dimensional objects. While there are several fast and reliable methods to align two surfaces, the tools a...
Andrea Torsello, Emanuele Rodola, Andrea Albarelli
RECOMB
2006
Springer
15 years 9 months ago
A Parameterized Algorithm for Protein Structure Alignment
This paper proposes a parameterized algorithm for aligning two protein structures, in the case where one protein structure is represented by a contact map graph and the other by a ...
Jinbo Xu, Feng Jiao, Bonnie Berger