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» Genetic Algorithms for Protein Threading
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77
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ISMB
1998
15 years 8 days ago
Genetic Algorithms for Protein Threading
Jacqueline Yadgari, Amihood Amir, Ron Unger
97
Voted
APBC
2004
123views Bioinformatics» more  APBC 2004»
15 years 10 days ago
Empirical Knowledge and Genetic Algorithms for Selection of Amide I Frequencies in Protein Secondary Structure Prediction
Here we investigate an extension of a previously suggested "automatic amide I frequency selection procedure" where we introduce an additional criterion utilizing empiric...
Joachim A. Hering, Peter R. Innocent, Parvez I. Ha...
112
Voted
BIBE
2010
IEEE
194views Bioinformatics» more  BIBE 2010»
14 years 7 months ago
Improved Immune Genetic Algorithm for Clustering Protein-Protein Interaction Network
Hamid Ravaee, Ali Masoudi-Nejad, Saeed Omidi, Ali ...
WABI
2005
Springer
109views Bioinformatics» more  WABI 2005»
15 years 4 months ago
Optimal Protein Threading by Cost-Splitting
Abstract. In this paper, we use integer programming approach for solving a hard combinatorial optimization problem, namely protein threading. For this sequence-to-structure alignme...
Philippe Veber, Nicola Yanev, Rumen Andonov, Vince...
107
Voted
AE
2005
Springer
15 years 4 months ago
An Enhanced Genetic Algorithm for Protein Structure Prediction Using the 2D Hydrophobic-Polar Model
This paper presents an enhanced genetic algorithm for the protein structure prediction problem. A new fitness function, that uses the concept of radius of gyration, is proposed. Al...
Heitor S. Lopes, Marcos P. Scapin